Link to B0047.4RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to C40A11.1Link to C40A11.9RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to Y57A10A.30b.2Link to Y57A10A.30aLink to Y57A10A.30b.1RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to W09B7.1Link to F07B7.1Link to F53A2.6.1Link to F53A2.6.3Link to F53A2.6.2geneMap
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RNAi Experiment: JA:B0047.4 Ace View of JA:B0047.4
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  B0047.4
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:2046105..2046958)
Transcript overlap: 510 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 447
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.823
Wormbase (BLAST) RNAi primary
External "B0047.4" Links  Wormbase NCBI
Gene Inhibited  C40A11.9
KOG Annotation  Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 59
Wormbase (BLAST) RNAi primary
External "C40A11.9" Links  Wormbase NCBI
Gene Inhibited  Y57A10A.30 (ife-5)
Description of "Y57A10A.30"  ife-5 encodes a member of the Initiation Factor 4E (eIF4E) family; it is expressed in the germ line.
KOG Annotation  Translation initiation factor 4F, cap-binding subunit (eIF-4E) and related cap-binding proteins
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 96
Relative score: 0.215 (Best raw score= for Gene )
Specificity index: 0.177
External "Y57A10A.30" Links  Wormbase NCBI
JA:B0047.4 Phenotypes Help with Phenotypes
Phenotype  WT
JA:B0047.4 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_B0047.4 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of B0047.4 Browse using GBrowse
Gene Graph
Gene Plot of C40A11.9 Browse using GBrowse
Gene Graph
Gene Plot of Y57A10A.30 Browse using GBrowse
Gene Graph