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RNAi Experiment: JA:B0244.3 Ace View of JA:B0244.3
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  B0244.2 (ida-1)
Description of "B0244.2"  ida-1 encodes a protein tyrosine phosphatase-like receptor, orthologous to the mammalian type I diabetes autoantigens IA-2 and phogrin that are expressed in dense core vesicles of neuroendocrine tissue and involved in regulated protein secretion; in C. elegans, IDA-1 appears to be required for regulating presynaptic neurotransmission and in particular, for the neuropeptidergic control of egg-laying; ida-1 interacts genetically with unc-31 and unc-64, which encode proteins required for dense core vesicle fusion and exocytosis; ida-1 expression is detected in a subset of neurons in the anterior nerve ring, the ventral nerve cord, the tail, and the vulva, including the VC vulval motoneurons and the HSN egg-laying neurons; ida-1 is also detected in the vulval uv1 cells, non-neuronal cells that contain neurosecretory-like vesicles.
KOG Annotation  Protein tyrosine phosphatase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:5754786..5755973)
Transcript overlap: 126 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 85
Relative score: 0.876 (Best raw score= for Gene )
Specificity index: 0.467
Wormbase (BLAST) RNAi primary
External "B0244.2" Links  Wormbase NCBI
Gene Inhibited  F16H11.2
Evidence for Inhibition 
Sliding Window Raw score: 97
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.533
External "F16H11.2" Links  Wormbase NCBI
JA:B0244.3 Phenotypes Help with Phenotypes
Phenotype  WT
JA:B0244.3 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_B0244.3 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of F16H11.2 Browse using GBrowse
Gene Graph
Gene Plot of B0244.2 Browse using GBrowse
Gene Graph