Link to B0250.8Link to B0250.7RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to B0250.1.1Link to B0250.1.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to B0250.3geneMap Link to B0250.3RNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to B0250.1.2Link to B0250.1.1geneMap Link to T10G3.5aLink to T10G3.5bLink to T10G3.6RNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
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RNAi Experiment: JA:B0250.7 Ace View of JA:B0250.7
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  B0250.7
Description of "B0250.7"  Associated GO Term : structural constituent of ribosome
KOG Annotation  60s ribosomal protein L2/L8
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (V:20471810..20474071)
Transcript overlap: 527 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 401
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.62
Wormbase (BLAST) RNAi primary
External "B0250.7" Links  Wormbase NCBI
Gene Inhibited  B0250.1 (rpl-2)
Description of "B0250.1"  rpl-2 encodes a large ribosomal subunit L8 protein.
KOG Annotation  60s ribosomal protein L2/L8
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 90
Relative score: 0.224 (Best raw score= for Gene )
Specificity index: 0.139
Wormbase (BLAST) RNAi primary
External "B0250.1" Links  Wormbase NCBI
Gene Inhibited  B0250.3
Description of "B0250.3"  Associated GO Term : structural constituent of ribosome
Evidence for Inhibition 
Sliding Window Raw score: 60
Relative score: 0.15 (Best raw score= for Gene )
Specificity index: 0.093
Wormbase (BLAST) RNAi primary
External "B0250.3" Links  Wormbase NCBI
Gene Inhibited  T10G3.5 (eea-1)
Description of "T10G3.5"  Associated GO Term : calcium ion binding
Evidence for Inhibition 
Sliding Window Raw score: 96
Relative score: 0.239 (Best raw score= for Gene )
Specificity index: 0.148
Wormbase (BLAST) RNAi secondary
External "T10G3.5" Links  Wormbase NCBI
JA:B0250.7 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 40 %
Larval  Gro
Phenotype  Pch
JA:B0250.7 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_B0250.7 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of B0250.7 Browse using GBrowse
Gene Graph
Gene Plot of B0250.1 Browse using GBrowse
Gene Graph
Gene Plot of B0250.3 Browse using GBrowse
Gene Graph
Gene Plot of T10G3.5 Browse using GBrowse
Gene Graph