Link to C02D4.2fLink to C02D4.2eLink to C02D4.2aLink to C02D4.2bLink to C02D4.2dLink to C02D4.2cRNAiRNAiRNAiRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: JA:C02D4.2 Ace View of JA:C02D4.2
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C02D4.2 (ser-2)
Description of "C02D4.2"  ser-2 encodes at least four tyramine 7-transmembrane domain receptors (GPCRs), by alternative splicing from three different promoters, that have distinct but partially overlapping expression patterns; ser-2 has at least three alternative promoters that drive SER-2 expression in a set of sensory, inter- and motor neurons (e.g., AIY, AIZ, and RIA) adding up to ~10% of all neurons in the nervous system, as well as pharyngeal cells and head muscles; the deletion ser-2(pk1397) has no obvious mutant phenotype; LIM-4 is required for SER-2 expression, and MAB-23 is required for SER-2 expression at normally high levels.
Evidence for Inhibition 
ePCR Status: Unique_ePCR (X:15286524..15288754)
Transcript overlap: 772 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 604
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "C02D4.2" Links  Wormbase NCBI
JA:C02D4.2 Phenotypes Help with Phenotypes
Phenotype  WT
JA:C02D4.2 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_C02D4.2 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of C02D4.2 Browse using GBrowse
Gene Graph