Link to C05D2.5Link to C05D2.8RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to C05D2.5Link to C05D2.8RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: JA:C05D2.7 Ace View of JA:C05D2.7
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C05D2.8
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:5607444..5608635)
Transcript overlap: 640 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 556
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "C05D2.8" Links  Wormbase NCBI
Gene Inhibited  C05D2.5 (gak-1)
Description of "C05D2.5"  gak-1 encodes a protein that contains an AT hook motif, a DNA-binding domain that shows a preference for binding stretches of A/T base pairs; GAK-1 appears to play a role in meiotic chromosome segregation, as overexpression results in post-prophase I chromosome segregation abnormalities, and a corresponding increase in embryonic lethality and the proportion of genotypically XO males in an otherwise self-fertile, XX hermaphrodite population; loss of gak-1 function via RNA-mediated interference (RNAi) results in sterility in the injected hermaphrodites, suggesting a possible role in germline development as well; gak-1 expression is enhanced in the germline, although its precise subcellular localization has not been reported.
Evidence for Inhibition 
ePCR Transcript overlap: 56 nt Explain types of evidence for RNAi inhibition
External "C05D2.5" Links  Wormbase NCBI
JA:C05D2.7 Phenotypes Help with Phenotypes
Phenotype  WT
JA:C05D2.7 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_C05D2.7 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of C05D2.8 Browse using GBrowse
Gene Graph
Gene Plot of C05D2.5 Browse using GBrowse
Gene Graph