Link to C08B6.4bLink to C08B6.4aRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to Y50D4A.3RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to T26F2.1RNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to R10D12.15geneMap Link to R10D12.15RNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to T26F2.1geneMap Link to C51E3.8Link to C51E3.9RNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
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RNAi Experiment: JA:C08B6.4 Ace View of JA:C08B6.4
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C08B6.4
Description of "C08B6.4"  Associated GO Term : chitinase activity
Evidence for Inhibition 
ePCR Status: Unique_ePCR (V:10118615..10119628)
Transcript overlap: 842 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 758
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.53
Wormbase (BLAST) RNAi primary
External "C08B6.4" Links  Wormbase NCBI
Gene Inhibited  Y50D4A.3
Description of "Y50D4A.3"  Associated GO Term : chitinase activity
KOG Annotation  Predicted chitinase
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 319
Relative score: 0.421 (Best raw score= for Gene )
Specificity index: 0.223
Wormbase (BLAST) RNAi primary
External "Y50D4A.3" Links  Wormbase NCBI
Gene Inhibited  T26F2.1
Description of "T26F2.1"  Associated GO Term : chitinase activity
Evidence for Inhibition 
Sliding Window Raw score: 136
Relative score: 0.179 (Best raw score= for Gene )
Specificity index: 0.095
Wormbase (BLAST) RNAi secondary
External "T26F2.1" Links  Wormbase NCBI
Gene Inhibited  R10D12.15
Description of "R10D12.15"  Associated GO Term : chitinase activity
KOG Annotation  Predicted chitinase
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 115
Relative score: 0.152 (Best raw score= for Gene )
Specificity index: 0.08
Wormbase (BLAST) RNAi secondary
External "R10D12.15" Links  Wormbase NCBI
Gene Inhibited  C51E3.8
Description of "C51E3.8"  Associated GO Term : chitinase activity
KOG Annotation  Predicted chitinase
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 102
Relative score: 0.135 (Best raw score= for Gene )
Specificity index: 0.071
Wormbase (BLAST) RNAi secondary
External "C51E3.8" Links  Wormbase NCBI
JA:C08B6.4 Phenotypes Help with Phenotypes
Phenotype  WT
JA:C08B6.4 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_C08B6.4 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of Y50D4A.3 Browse using GBrowse
Gene Graph
Gene Plot of T26F2.1 Browse using GBrowse
Gene Graph
Gene Plot of R10D12.15 Browse using GBrowse
Gene Graph
Gene Plot of C08B6.4 Browse using GBrowse
Gene Graph
Gene Plot of C51E3.8 Browse using GBrowse
Gene Graph