Link to C09G12.1RNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to Y38H6C.7RNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to C09G12.1geneMap
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RNAi Experiment: JA:C09G12.1 Ace View of JA:C09G12.1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C09G12.1
Description of "C09G12.1"  C09G12.1 encodes a paired-like homeodomain protein of the K50 class, which has no obvious function in mass RNAi assays.
KOG Annotation  DNA-binding centromere protein B (CENP-B)
Vacuolar assembly/sorting protein VPS41
Transcription factor PRD and related proteins, contain PAX and HOX domains
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (IV:3501323..3503601)
Transcript overlap: 762 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 636
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.895
Wormbase (BLAST) RNAi primary
External "C09G12.1" Links  Wormbase NCBI
Gene Inhibited  C33G3.t3
Evidence for Inhibition 
Sliding Window Raw score: 75
Relative score: 0.118 (Best raw score= for Gene )
Specificity index: 0.105
External "C33G3.t3" Links  Wormbase NCBI
Gene Inhibited  Y38H6C.7
Evidence for Inhibition 
Sliding Window Raw score: 59
External "Y38H6C.7" Links  Wormbase NCBI
JA:C09G12.1 Phenotypes Help with Phenotypes
Phenotype  WT
JA:C09G12.1 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_C09G12.1 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of C33G3.T3 Browse using GBrowse
Gene Graph
Gene Plot of C09G12.1 Browse using GBrowse
Gene Graph
Gene Plot of Y38H6C.7 Browse using GBrowse
Gene Graph