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RNAi Experiment: JA:C15A11.6 Ace View of JA:C15A11.6
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C15A11.6 (col-62)
Description of "C15A11.6"  Associated GO Term : structural constituent of cuticle
KOG Annotation  Collagens (type IV and type XIII), and related proteins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:7403208..7404393)
Transcript overlap: 951 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 888
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.511
Wormbase (BLAST) RNAi primary
External "C15A11.6" Links  Wormbase NCBI
Gene Inhibited  C15A11.5 (col-7)
Description of "C15A11.5"  col-7 encodes a member of the collagen superfamily containing collagen triple helix repeats (20 copies); expressed during the L2-to-dauer molt and the L4-to-adult molt.
KOG Annotation  Collagens (type IV and type XIII), and related proteins
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 851
Relative score: 0.958 (Best raw score= for Gene )
Specificity index: 0.489
Wormbase (BLAST) RNAi primary
External "C15A11.5" Links  Wormbase NCBI
JA:C15A11.6 Phenotypes Help with Phenotypes
Phenotype  WT
JA:C15A11.6 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_C15A11.6 (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of C15A11.5 Browse using GBrowse
Gene Graph
Gene Plot of C15A11.6 Browse using GBrowse
Gene Graph