Link to C25A1.1Link to C25A1.2RNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
RNAi Experiment: JA:C25A1.2 Ace View of JA:C25A1.2
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C25A1.2 (fkh-10)
Description of "C25A1.2"  fkh-10 encodes one of 15 forkhead transcriptional regulators encoded by the C. elegans genome; by homology, FKH-10 is predicted to function as a transcription factor that regulates gene expression during development; however, as loss of fkh-10 activity via RNA-mediated interference (RNAi) does not result in any obvious abnormalities, the precise role of FKH-10 in C. elegans development and/or behavior is not yet known; nevertheless, reporter gene studies indicate that throughout larval and adult stages, fkh-10 expression is detected almost exclusively in six pairs of neuronal nuclei near the terminal bulb of the pharynx, suggesting that FKH-10 may have a specific function in neuronal differentiation.
KOG Annotation  Transcription factor of the Forkhead/HNF3 family
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:10163557..10165851)
Transcript overlap: 693 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 609
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "C25A1.2" Links  Wormbase NCBI
JA:C25A1.2 Phenotypes Help with Phenotypes
Phenotype  WT
JA:C25A1.2 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_C25A1.2 (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of C25A1.2 Browse using GBrowse
Gene Graph