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RNAi Experiment: JA:C25A1.3 Ace View of JA:C25A1.3
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C25A1.3 (tag-72)
Description of "C25A1.3"  Associated GO Term : mRNA capping
KOG Annotation  mRNA cap methyltransferase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (I:10159652..10161886)
Transcript overlap: 1244 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 1139
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.892
Wormbase (BLAST) RNAi primary
External "C25A1.3" Links  Wormbase NCBI
Gene Inhibited  F16C3.4
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (I:10159652..10161886)
Transcript overlap: 201 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 138
Relative score: 0.121 (Best raw score= for Gene )
Specificity index: 0.108
Wormbase (BLAST) RNAi primary
External "F16C3.4" Links  Wormbase NCBI
JA:C25A1.3 Phenotypes Help with Phenotypes
Phenotype  WT
JA:C25A1.3 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_C25A1.3 (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of F16C3.4 Browse using GBrowse
Gene Graph
Gene Plot of C25A1.3 Browse using GBrowse
Gene Graph