Link to C25A8.2Link to C25A8.1RNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to C06G3.7RNAiRNAiRNAi ReagentgeneMap
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RNAi Experiment: JA:C25A8.1 Ace View of JA:C25A8.1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C25A8.1
Evidence for Inhibition 
ePCR Status: Unique_ePCR (IV:7011058..7011989)
Transcript overlap: 114 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 93
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "C25A8.1" Links  Wormbase NCBI
Gene Inhibited  C06G3.7 (trxr-1)
Description of "C06G3.7"  C06G3.7 encodes an homolog of the mammalian thioredoxin reductase isozymes TR1 and TR2; like its mammalian homologs, C06G3.7 has a TGA-encoded C-terminal penultimate selenocysteine (Sec) residue; labelling of C. elegans with selenium-75 demonstrates that TR-Se is the major naturally occurring selenoprotein in C. elegans, and computational analysis indicates that it is probably the only selenoprotein encoded by the genome; the 3'-untranslated region of this gene contains a selenocysteine insertion sequence that is functional in mammalian cell culture; by phylogenetic profiling, C06G3.7 protein is predicted to be mitochondrial.
KOG Annotation  Thioredoxin reductase
What's a KOG?
Evidence for Inhibition 
ePCR Transcript overlap: 3 nt Explain types of evidence for RNAi inhibition
External "C06G3.7" Links  Wormbase NCBI
JA:C25A8.1 Phenotypes Help with Phenotypes
Phenotype  WT
JA:C25A8.1 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_C25A8.1 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of C25A8.1 Browse using GBrowse
Gene Graph
Gene Plot of C06G3.7 Browse using GBrowse
Gene Graph