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RNAi Experiment: JA:C25H3.4 Ace View of JA:C25H3.4
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C25H3.4
Description of "C25H3.4"  Associated GO Term : RNA binding
KOG Annotation  Filamentous baseplate protein Ligatin, contains PUA domain
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:5692239..5693385)
Transcript overlap: 807 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 744
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.885
Wormbase (BLAST) RNAi primary
External "C25H3.4" Links  Wormbase NCBI
Gene Inhibited  ZK1236.6 (pqn-96)
Description of "ZK1236.6"  The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
Evidence for Inhibition 
Sliding Window Raw score: 97
Relative score: 0.13 (Best raw score= for Gene )
Specificity index: 0.115
External "ZK1236.6" Links  Wormbase NCBI
JA:C25H3.4 Phenotypes Help with Phenotypes
Phenotype  WT
JA:C25H3.4 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_C25H3.4 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of ZK1236.6 Browse using GBrowse
Gene Graph
Gene Plot of C25H3.4 Browse using GBrowse
Gene Graph