Link to C27C7.1RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to T16G12.3Link to H11L12.1geneMap Link to H11L12.1RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to C27C7.1Link to T16G12.3geneMap Link to T16G12.3RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to H11L12.1Link to C27C7.1geneMap
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RNAi Experiment: JA:C27C7.1 Ace View of JA:C27C7.1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C27C7.1
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:11438986..11440554)
Transcript overlap: 963 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 858
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.592
Wormbase (BLAST) RNAi primary
External "C27C7.1" Links  Wormbase NCBI
Gene Inhibited  H11L12.1
Evidence for Inhibition 
Sliding Window Raw score: 337
Relative score: 0.393 (Best raw score= for Gene )
Specificity index: 0.233
Wormbase (BLAST) RNAi primary
External "H11L12.1" Links  Wormbase NCBI
Gene Inhibited  T16G12.3
KOG Annotation  Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 254
Relative score: 0.296 (Best raw score= for Gene )
Specificity index: 0.175
Wormbase (BLAST) RNAi primary
External "T16G12.3" Links  Wormbase NCBI
JA:C27C7.1 Phenotypes Help with Phenotypes
Phenotype  WT
JA:C27C7.1 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_C27C7.1 (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of C27C7.1 Browse using GBrowse
Gene Graph
Gene Plot of H11L12.1 Browse using GBrowse
Gene Graph
Gene Plot of T16G12.3 Browse using GBrowse
Gene Graph