| RNAi Experiment: JA:C33A12.5 |
Ace View of JA:C33A12.5
|
| Genes Inhibited |
 |
| Gene Inhibited |
T12B5.6 |
| Description of "T12B5.6" |
This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. |
| Evidence for Inhibition |
| ePCR |
Status: Top85_percentile_ePCR (III:934706..935531)
Transcript overlap: 826 nt |
|
| Sliding Window |
Raw score: 730
Relative score: 0.958 (Best raw score= for Gene )
Specificity index: 0.153 |
| Wormbase (BLAST) |
RNAi primary |
|
| External "T12B5.6" Links |
  |
| Gene Inhibited |
Y57E12AL.3 |
| Evidence for Inhibition |
| Sliding Window |
Raw score: 761
Relative score: 0.999 (Best raw score= for Gene )
Specificity index: 0.16 |
| Wormbase (BLAST) |
RNAi primary |
|
| External "Y57E12AL.3" Links |
|
| Gene Inhibited |
T06A1.6 |
| Evidence for Inhibition |
| Sliding Window |
Raw score: 262
Relative score: 0.344 (Best raw score= for Gene )
Specificity index: 0.055 |
|
| External "T06A1.6" Links |
|
| Gene Inhibited |
Y40H7A.2 |
| Evidence for Inhibition |
| Sliding Window |
Raw score: 111
Relative score: 0.146 (Best raw score= for Gene )
Specificity index: 0.023 |
|
| External "Y40H7A.2" Links |
|
| Gene Inhibited |
D1054.4 |
| Evidence for Inhibition |
| Sliding Window |
Raw score: 750
Relative score: 0.984 (Best raw score= for Gene )
Specificity index: 0.158 |
| Wormbase (BLAST) |
RNAi primary |
|
| External "D1054.4" Links |
|
| Gene Inhibited |
B0280.6 |
| Evidence for Inhibition |
| Sliding Window |
Raw score: 641
Relative score: 0.841 (Best raw score= for Gene )
Specificity index: 0.135 |
| Wormbase (BLAST) |
RNAi primary |
|
| External "B0280.6" Links |
|
| Gene Inhibited |
H28G03.5 |
| Evidence for Inhibition |
| Sliding Window |
Raw score: 739
Relative score: 0.97 (Best raw score= for Gene )
Specificity index: 0.155 |
| Wormbase (BLAST) |
RNAi primary |
|
| External "H28G03.5" Links |
|
| Gene Inhibited |
Y68A4A.4 |
| Evidence for Inhibition |
| Sliding Window |
Raw score: 762
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.16 |
| Wormbase (BLAST) |
RNAi primary |
|
| External "Y68A4A.4" Links |
|
| JA:C33A12.5 Phenotypes |
|
|
| Phenotype |
WT
|
| JA:C33A12.5 Experiment Details |
Ace View |
| Laboratory |
JA |
| RNAi Reagent & Type |
sjj_C33A12.5 (PCR_reagent) |
| Reference |
Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...." |
| Date |
2003-1-10 |
| Gene Plot of H28G03.5 |
Browse using GBrowse
|
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| Gene Plot of B0280.6 |
Browse using GBrowse
|
 |
| Gene Plot of Y57E12AL.3 |
Browse using GBrowse
|
 |
| Gene Plot of Y68A4A.4 |
Browse using GBrowse
|
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| Gene Plot of T06A1.6 |
Browse using GBrowse
|
 |
| Gene Plot of Y40H7A.2 |
Browse using GBrowse
|
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| Gene Plot of T12B5.6 |
Browse using GBrowse
|
 |
| Gene Plot of D1054.4 |
Browse using GBrowse
|
 |
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