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RNAi Experiment: JA:C35B1.1 Ace View of JA:C35B1.1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C35B1.1 (ubc-1)
Description of "C35B1.1"  ubc-1 encodes an E2 ubiquitin-conjugating enzyme that contains a novel 40 amino acid C-terminal tail, and is homologous to Saccharomyces cerevisiae RAD6/UBC2 which is involved in DNA repair; although loss of UBC-1 activity via RNA-mediated interference (RNAi) does not result in any abnormalities, UBC-1 is able to complement the DNA repair defects of a Saccharomyces cerevisiae rad6 null mutant, suggesting that UBC-1 can function in the DNA repair pathway; ubc-1 mRNA is detectable in embryos.
KOG Annotation  Ubiquitin-protein ligase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (IV:4103017..4105221)
Transcript overlap: 637 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 574
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "C35B1.1" Links  Wormbase NCBI
JA:C35B1.1 Phenotypes Help with Phenotypes
Phenotype  WT
JA:C35B1.1 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_C35B1.1 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of C35B1.1 Browse using GBrowse
Gene Graph