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RNAi Experiment: JA:C37G2.6 Ace View of JA:C37G2.6
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y66A7A.6 (gly-8)
Description of "Y66A7A.6"  gly-8 encodes a predicted transmembrane polypeptide N-acetylgalactosaminyl transferase (ppGaNTase) similar to the essential Drosophila ppGaNTase encoded by Pgant35A; by homology, GLY-8 is predicted to function as a Golgi enzyme that catalyzes transfer of N-acetylgalactosamine to serine and threonine-containing acceptor peptides, thus initiating mucin-type O-glycosylation; as loss of gly-8 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of GLY-8 in C. elegans development and/or behavior is not yet known.
KOG Annotation  Polypeptide N-acetylgalactosaminyltransferase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:11626353..11627991)
Transcript overlap: 809 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 683
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y66A7A.6" Links  Wormbase NCBI
JA:C37G2.6 Phenotypes Help with Phenotypes
Phenotype  WT
JA:C37G2.6 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_C37G2.6 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of Y66A7A.6 Browse using GBrowse
Gene Graph