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RNAi Experiment: JA:C39E9.9 Ace View of JA:C39E9.9
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C39E9.9 (col-132)
Description of "C39E9.9"  Associated GO Term : structural constituent of cuticle
KOG Annotation  Collagens (type IV and type XIII), and related proteins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (IV:13089456..13091101)
Transcript overlap: 831 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 789
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.886
Wormbase (BLAST) RNAi primary
External "C39E9.9" Links  Wormbase NCBI
Gene Inhibited  C39E9.10
Description of "C39E9.10"  Associated GO Term : transporter activity
KOG Annotation  Sugar transporter/spinster transmembrane protein
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (IV:13089456..13091101)
Transcript overlap: 123 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 102
Relative score: 0.129 (Best raw score= for Gene )
Specificity index: 0.114
External "C39E9.10" Links  Wormbase NCBI
JA:C39E9.9 Phenotypes Help with Phenotypes
Phenotype  WT
JA:C39E9.9 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_C39E9.9 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of C39E9.9 Browse using GBrowse
Gene Graph
Gene Plot of C39E9.10 Browse using GBrowse
Gene Graph