| RNAi Experiment: JA:C41G7.6 |
Ace View of JA:C41G7.6
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| Genes Inhibited |
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| Gene Inhibited |
C41G7.6 |
| Evidence for Inhibition |
| ePCR |
Status: Best_ePCR (I:9526363..9527898)
Transcript overlap: 768 nt |
|
| Sliding Window |
Raw score: 621
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.875 |
| Wormbase (BLAST) |
RNAi primary |
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| External "C41G7.6" Links |
  |
| Gene Inhibited |
C41G7.5 (ahr-1) |
| Description of "C41G7.5" |
ahr-1 encodes an aryl hydrocarbon receptor (ligand-activated basic helix-loop-helix transcription factor) ortholog that biochemically resembles its vertebrate relatives (OMIM:600253) which mediate the carcinogenic and teratogenic effects of environmental toxins; AHR-1 binds HSP90 tightly, and forms a dimer with AHA-1 that binds DNA fragments containing the mammalian xenobiotic response element; AHR-1 is expressed in neurons, and may play a role in neuronal migration. |
| Evidence for Inhibition |
| ePCR |
Status: Bottom50_percentile_ePCR (I:9526363..9527898)
Transcript overlap: 89 nt |
|
| Sliding Window |
Raw score: 89
Relative score: 0.143 (Best raw score= for Gene )
Specificity index: 0.125 |
| Wormbase (BLAST) |
RNAi primary |
|
| External "C41G7.5" Links |
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| JA:C41G7.6 Phenotypes |
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|
| Phenotype |
WT
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| JA:C41G7.6 Experiment Details |
Ace View |
| Laboratory |
JA |
| RNAi Reagent & Type |
sjj_C41G7.6 (PCR_reagent) |
| Reference |
Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...." |
| Date |
2000-11-16 |
| Gene Plot of C41G7.6 |
Browse using GBrowse
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| Gene Plot of C41G7.5 |
Browse using GBrowse
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