Link to C46H11.4aLink to C46H11.4bLink to C46H11.4cLink to C46H11.3RNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to C46H11.4cLink to C46H11.4bLink to C46H11.4aLink to C46H11.3RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: JA:C46H11.3 Ace View of JA:C46H11.3
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C46H11.3
Description of "C46H11.3"  Associated GO Term : regulation of actin polymerization
KOG Annotation  Actin-related protein Arp2/3 complex, subunit ARPC5
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (I:5040987..5042057)
Transcript overlap: 441 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 399
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.76
Wormbase (BLAST) RNAi primary
External "C46H11.3" Links  Wormbase NCBI
Gene Inhibited  C46H11.4 (lfe-2)
Description of "C46H11.4"  Associated GO Term : inositol-trisphosphate 3-kinase activity
KOG Annotation  1D-myo-inositol-triphosphate 3-kinase A
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (I:5040987..5042057)
Transcript overlap: 168 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 126
Relative score: 0.316 (Best raw score= for Gene )
Specificity index: 0.24
External "C46H11.4" Links  Wormbase NCBI
JA:C46H11.3 Phenotypes Help with Phenotypes
Phenotype  WT
JA:C46H11.3 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_C46H11.3 (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of C46H11.3 Browse using GBrowse
Gene Graph
Gene Plot of C46H11.4 Browse using GBrowse
Gene Graph