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RNAi Experiment: JA:C47F8.2 Ace View of JA:C47F8.2
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C47F8.2 (nhr-165)
Description of "C47F8.2"  Associated GO Term : transcription factor activity
KOG Annotation  Hormone receptors
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:12332038..12333613)
Transcript overlap: 845 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 740
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.803
Wormbase (BLAST) RNAi primary
External "C47F8.2" Links  Wormbase NCBI
Gene Inhibited  T12C9.3 (twk-2)
Description of "T12C9.3"  twk-2 encodes one of 44 C. elegans TWK (two-P domain K+) potassium channel subunits that contain two pore-forming domains and four transmembrane domains; the precise role of TWK-2 in C. elegans development and/or behavior is not yet known, but TWK-2 may function redundantly with other TWK channels; TWK-2 is expressed in a subset of neurons.
KOG Annotation  Tandem pore domain K+ channel
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 182
Relative score: 0.246 (Best raw score= for Gene )
Specificity index: 0.197
External "T12C9.3" Links  Wormbase NCBI
JA:C47F8.2 Phenotypes Help with Phenotypes
Phenotype  WT
JA:C47F8.2 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_C47F8.2 (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of T12C9.3 Browse using GBrowse
Gene Graph
Gene Plot of C47F8.2 Browse using GBrowse
Gene Graph