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RNAi Experiment: JA:C49H3.4 Ace View of JA:C49H3.4
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C49H3.4
Description of "C49H3.4"  Associated GO Term : mRNA processing
Evidence for Inhibition 
ePCR Status: Unique_ePCR (IV:7915128..7916478)
Transcript overlap: 576 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 513
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "C49H3.4" Links  Wormbase NCBI
Gene Inhibited  C49H3.10 (imb-6)
Description of "C49H3.10"  imb-6 encodes an importin-beta-like protein orthologous to vertebrate Exportin-t, a specific mediator of tRNA export from the nucleus; IMB-6 is predicted to function by binding tRNAs directly in the presence of the RAN-1 GTPase and facilitating their nucleocytoplasmic transport; in C. elegans, loss of imb-6 function via RNA-mediated interference (RNAi) does not result in any obvious abnormalities.
KOG Annotation  Nuclear mRNA export factor receptor LOS1/Exportin-t (importin beta superfamily)
What's a KOG?
Evidence for Inhibition 
ePCR Transcript overlap: 8 nt Explain types of evidence for RNAi inhibition
External "C49H3.10" Links  Wormbase NCBI
JA:C49H3.4 Phenotypes Help with Phenotypes
Phenotype  WT
JA:C49H3.4 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_C49H3.4 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of C49H3.4 Browse using GBrowse
Gene Graph
Gene Plot of C49H3.10 Browse using GBrowse
Gene Graph