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RNAi Experiment: JA:C53D5.a Ace View of JA:C53D5.a
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C53D5.6 (imb-3)
Description of "C53D5.6"  imb-3 encodes an importin-beta-like protein orthologous to Drosophila, vertebrate, and yeast importin/karyopherin-beta3; IMB-3 is predicted to function as a nuclear transport factor that, with the RAN-1 GTPase, regulates nuclear import of ribosomal proteins; in C. elegans, IMB-3 is essential for embryogenesis and germline development, and may also be required for normal postembryonic growth rates.
KOG Annotation  Karyopherin (importin) beta 3
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:311632..314097)
Transcript overlap: 2320 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 2257
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "C53D5.6" Links  Wormbase NCBI
JA:C53D5.a Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 100 % Led (Enclosed)
Larval  Gro
Adult  Ste brood size range (1 out of 5)
Movies/Stacks/Images  /static/images/movie.gif /static/images/movie.gif Help
JA:C53D5.a Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_C53D5.a (PCR_reagent)
Remark  osmotically sensitive eggs
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of C53D5.6 Browse using GBrowse
Gene Graph