Link to C54E10.5RNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y17D7B.1Link to M02H5.6geneMap Link to Y17D7B.1RNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to C54E10.5geneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: JA:C54E10.5 Ace View of JA:C54E10.5
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C54E10.5 (nhr-170)
Description of "C54E10.5"  Associated GO Term : transcription factor activity
KOG Annotation  Hormone receptors
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (V:18798832..18800530)
Transcript overlap: 625 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 541
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.569
Wormbase (BLAST) RNAi primary
External "C54E10.5" Links  Wormbase NCBI
Gene Inhibited  Y17D7B.1 (nhr-231)
Description of "Y17D7B.1"  Associated GO Term : transcription factor activity
KOG Annotation  Hormone receptors
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 409
Relative score: 0.756 (Best raw score= for Gene )
Specificity index: 0.431
Wormbase (BLAST) RNAi primary
External "Y17D7B.1" Links  Wormbase NCBI
JA:C54E10.5 Phenotypes Help with Phenotypes
Phenotype  WT
JA:C54E10.5 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_C54E10.5 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of C54E10.5 Browse using GBrowse
Gene Graph
Gene Plot of Y17D7B.1 Browse using GBrowse
Gene Graph