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RNAi Experiment: JA:C54G4.6 Ace View of JA:C54G4.6
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C54G4.6 (dod-18)
Description of "C54G4.6"  This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial.
KOG Annotation  Predicted nucleic acid-binding protein ASMTL
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (I:8019637..8020767)
Transcript overlap: 548 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 401
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.773
Wormbase (BLAST) RNAi primary
External "C54G4.6" Links  Wormbase NCBI
Gene Inhibited  C54G4.7
KOG Annotation  Uncharacterized conserved protein
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (I:8019637..8020767)
Transcript overlap: 158 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 118
Relative score: 0.294 (Best raw score= for Gene )
Specificity index: 0.227
External "C54G4.7" Links  Wormbase NCBI
JA:C54G4.6 Phenotypes Help with Phenotypes
Phenotype  WT
JA:C54G4.6 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_C54G4.6 (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of C54G4.6 Browse using GBrowse
Gene Graph
Gene Plot of C54G4.7 Browse using GBrowse
Gene Graph