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RNAi Experiment: JA:C55B7.12 Ace View of JA:C55B7.12
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C55B7.12 (che-1)
Description of "C55B7.12"  che-1 encodes a C2H2-type zinc finger-containing transcription factor orthologous to Drosophila GLASS, which is required for photoreceptor cell differentiation; CHE-1 is required for determining the identity and function of the amphid ASE neurons, the major neurons that mediate chemotaxis to water-soluble attractants; CHE-1 is expressed predominantly in the ASE neurons and regulates, either directly or indirectly, the expression of a number of ASE-specific genes.
KOG Annotation  Zn-finger
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:6517516..6520211)
Transcript overlap: 576 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 474
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "C55B7.12" Links  Wormbase NCBI
JA:C55B7.12 Phenotypes Help with Phenotypes
Phenotype  WT
JA:C55B7.12 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_C55B7.12 (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of C55B7.12 Browse using GBrowse
Gene Graph