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RNAi Experiment: JA:C56G2.6 Ace View of JA:C56G2.6
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C56G2.6 (let-767)
Description of "C56G2.6"  let-767 encodes a short-chain dehydrogenase, reported to be required for efficient cholesterol metabolism; LET-767 is predicted to be required for the metabolism of a sterol and to be mitochondrial.
KOG Annotation  17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3
What's a KOG?
Evidence for Inhibition 
ePCR Status: Top85_percentile_ePCR (III:6338677..6339826)
Transcript overlap: 819 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 735
Relative score: 0.934 (Best raw score= for Gene )
Specificity index: 0.483
Wormbase (BLAST) RNAi primary
External "C56G2.6" Links  Wormbase NCBI
Gene Inhibited  C56G2.7
Description of "C56G2.7"  Associated GO Term : cell adhesion
KOG Annotation  Cell membrane glycoprotein
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:6338677..6339826)
Transcript overlap: 871 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 787
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.517
External "C56G2.7" Links  Wormbase NCBI
JA:C56G2.6 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 80 %
Larval  Gro
Adult  Clr
Ste
Unc
Phenotype  Adl
JA:C56G2.6 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_C56G2.6 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of C56G2.7 Browse using GBrowse
Gene Graph
Gene Plot of C56G2.6 Browse using GBrowse
Gene Graph