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RNAi Experiment: JA:D2089.1 Ace View of JA:D2089.1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  D2089.1 (rsp-7)
Description of "D2089.1"  Associated GO Term : nucleotide binding
Evidence for Inhibition 
ePCR Status: Best_ePCR (II:10660498..10661980)
Transcript overlap: 737 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 716
Relative score: 0.363 (Best raw score=716 for Gene D2089.1)
Specificity index: 0.266
Wormbase (BLAST) RNAi primary
External "D2089.1" Links  Wormbase NCBI
Gene Inhibited  D2089.2
Description of "D2089.2"  Associated GO Term : ubiquitin-protein ligase activity
KOG Annotation  Protein involved in mRNA turnover and stability
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (II:10660498..10661980)
Transcript overlap: 332 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 248
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.734
Wormbase (BLAST) RNAi primary
External "D2089.2" Links  Wormbase NCBI
JA:D2089.1 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 100 %
Larval  Lvl
Phenotype  Pch
Slu
JA:D2089.1 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_D2089.1 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of D2089.2 Browse using GBrowse
Gene Graph
Gene Plot of D2089.1 Browse using GBrowse
Gene Graph