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RNAi Experiment: JA:E03H4.8 Ace View of JA:E03H4.8
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  E03H4.8
Description of "E03H4.8"  Associated GO Term : protein transporter activity
KOG Annotation  Vesicle coat complex COPI, beta' subunit
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:12425073..12426237)
Transcript overlap: 747 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 664
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.885
Wormbase (BLAST) RNAi primary
External "E03H4.8" Links  Wormbase NCBI
Gene Inhibited  F38E11.5
Description of "F38E11.5"  F38E11.5 encodes a beta' (beta-prime) subunit of the coatomer (COPI) complex; in mass RNAi assays, F38E11.5 is required for fertility and general health.
KOG Annotation  Vesicle coat complex COPI, beta' subunit
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 86
Relative score: 0.13 (Best raw score= for Gene )
Specificity index: 0.115
Wormbase (BLAST) RNAi secondary
External "F38E11.5" Links  Wormbase NCBI
JA:E03H4.8 Phenotypes Help with Phenotypes
Larval  Gro
Adult  Clr
Ste brood size range (1 out of 5)
Stp
Unc
JA:E03H4.8 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_E03H4.8 (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of E03H4.8 Browse using GBrowse
Gene Graph
Gene Plot of F38E11.5 Browse using GBrowse
Gene Graph