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RNAi Experiment: JA:EGAP2.3 Ace View of JA:EGAP2.3
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  EGAP2.3 (pho-1)
Description of "EGAP2.3"  pho-1 encodes the major C. elegans intestinal acid phosphatase; as loss of PHO-1 function via RNA-mediated interference (RNAi) does not result in any abnormalities, PHO-1 may function redundantly with other acid phosphatases; PHO-1 intestinal expression appears to be positively regulated by CKI-1, a cyclin-dependent kinase inhibitor, and negatively regulated by POP-1, a TCF/LEF transcription factor; PHO-1 is expressed along the intestinal brush border in all gut cells except the most anterior int-1 and int-2 cells, beginning at the three-fold stage of embryogenesis.
KOG Annotation  Lysosomal & prostatic acid phosphatases
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:5233627..5235161)
Transcript overlap: 784 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 658
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "EGAP2.3" Links  Wormbase NCBI
JA:EGAP2.3 Phenotypes Help with Phenotypes
Phenotype  WT
JA:EGAP2.3 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_EGAP2.3 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of EGAP2.3 Browse using GBrowse
Gene Graph