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RNAi Experiment: JA:F09E8.3 Ace View of JA:F09E8.3
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F09E8.3 (msh-5)
Description of "F09E8.3"  msh-5 encodes a germline-specific homolog of the yeast and mammalian DNA mismatch repair protein MSH5 (MutS-family) that is required for crossing over and chiasma formation during Caenorhabditis elegans meiosis; inactivation of both rad-51 and msh-5 induces chromosome fragmentation, not seen with inactivation of either gene alone.
KOG Annotation  Mismatch repair ATPase MSH5 (MutS family)
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (IV:13158963..13160139)
Transcript overlap: 803 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 761
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F09E8.3" Links  Wormbase NCBI
JA:F09E8.3 Phenotypes Help with Phenotypes
Phenotype  WT
JA:F09E8.3 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_F09E8.3 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of F09E8.3 Browse using GBrowse
Gene Graph