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RNAi Experiment: JA:F14H12.1 Ace View of JA:F14H12.1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F14H12.1 (col-165)
Description of "F14H12.1"  Associated GO Term : structural constituent of cuticle
KOG Annotation  Collagens (type IV and type XIII), and related proteins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (X:4353772..4354971)
Transcript overlap: 920 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 836
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.874
Wormbase (BLAST) RNAi primary
External "F14H12.1" Links  Wormbase NCBI
Gene Inhibited  T13B5.4 (col-40)
Description of "T13B5.4"  col-40 encodes a cuticle collagen protein that belongs to the col-6 cuticle collagen family; col-40 transcript is present in L1 larvae and at the L2d-dauer molt.
KOG Annotation  Collagens (type IV and type XIII), and related proteins
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 121
Relative score: 0.145 (Best raw score= for Gene )
Specificity index: 0.126
External "T13B5.4" Links  Wormbase NCBI
JA:F14H12.1 Phenotypes Help with Phenotypes
Phenotype  WT
JA:F14H12.1 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_F14H12.1 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of T13B5.4 Browse using GBrowse
Gene Graph
Gene Plot of F14H12.1 Browse using GBrowse
Gene Graph