Link to F28D1.11RNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to F28D1.11Link to F28D1.9RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: JA:F28D1.11 Ace View of JA:F28D1.11
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F28D1.11
KOG Annotation  Dolichol-phosphate mannosyltransferase, subunit 3
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (IV:12391256..12392371)
Transcript overlap: 375 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 312
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.554
Wormbase (BLAST) RNAi primary
External "F28D1.11" Links  Wormbase NCBI
Gene Inhibited  F28D1.9
Description of "F28D1.9"  Associated GO Term : catalytic activity
KOG Annotation  Very long-chain acyl-CoA synthetase/fatty acid transporter
What's a KOG?
Evidence for Inhibition 
ePCR Status: Top50_percentile_ePCR (IV:12391256..12392371)
Transcript overlap: 272 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 251
Relative score: 0.804 (Best raw score= for Gene )
Specificity index: 0.446
External "F28D1.9" Links  Wormbase NCBI
JA:F28D1.11 Phenotypes Help with Phenotypes
Phenotype  WT
JA:F28D1.11 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_F28D1.11 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of F28D1.11 Browse using GBrowse
Gene Graph
Gene Plot of F28D1.9 Browse using GBrowse
Gene Graph