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RNAi Experiment: JA:F28H1.3 Ace View of JA:F28H1.3
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F28H1.3 (ars-2)
Description of "F28H1.3"  ars-2 encodes a predicted cytoplasmic alanyl-tRNA synthetase (AlaRS), a class II aminoacyl-tRNA synthetase that catalyzes the attachment of alanine to its cognate tRNA and is thus required for protein biosynthesis; ARS-2 is essential for embryogenesis, and is required for fertility and a normal rate of postembryonic development; ARS-2 expression is likely ubiquitous and detected in hypodermis, intestine, neurons, and the pharynx from late embryogenesis through the adult stage of development.
KOG Annotation  Alanyl-tRNA synthetase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:3984015..3985192)
Transcript overlap: 1128 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 1086
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F28H1.3" Links  Wormbase NCBI
JA:F28H1.3 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 50 - 80 %
Larval  Gro
Adult  Ste brood size range (1 out of 5)
JA:F28H1.3 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_F28H1.3 (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of F28H1.3 Browse using GBrowse
Gene Graph