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RNAi Experiment: JA:F29B9.9 Ace View of JA:F29B9.9
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F29B9.9 (col-111)
Description of "F29B9.9"  Associated GO Term : structural constituent of cuticle
KOG Annotation  Collagens (type IV and type XIII), and related proteins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (IV:4655958..4657638)
Transcript overlap: 862 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 778
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.798
Wormbase (BLAST) RNAi primary
External "F29B9.9" Links  Wormbase NCBI
Gene Inhibited  F29B9.4 (psr-1)
Description of "F29B9.4"  psr-1 encodes an ortholog of the mammalian apoptotic phosphatidylserine receptor, whose product recognizes phosphatidylserine on apoptotic cells and enables cells expressing the receptor to recognize and engulf apoptotic cells in a phosphatidylserine-specific manner; psr-1 was not mutated in classical screens for Ced mutants, but, given its high similarity, may nevertheless mediate phosphatidylserine recognition on apoptotic cells during their removal by phagocytes.
KOG Annotation  Phosphatidylserine-specific receptor PtdSerR, contains JmjC domain
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (IV:4655958..4657638)
Transcript overlap: 218 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 197
Relative score: 0.253 (Best raw score= for Gene )
Specificity index: 0.202
External "F29B9.4" Links  Wormbase NCBI
JA:F29B9.9 Phenotypes Help with Phenotypes
Phenotype  WT
JA:F29B9.9 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_F29B9.9 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of F29B9.4 Browse using GBrowse
Gene Graph
Gene Plot of F29B9.9 Browse using GBrowse
Gene Graph