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RNAi Experiment: JA:F32D1.2 Ace View of JA:F32D1.2
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F32D1.2
Description of "F32D1.2"  Associated GO Term : hydrogen-transporting ATP synthase activity, rotational mechanism
KOG Annotation  Mitochondrial F1F0-ATP synthase, subunit epsilon/ATP15
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (V:4345859..4346768)
Transcript overlap: 291 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 249
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F32D1.2" Links  Wormbase NCBI
Gene Inhibited  F32D1.1
Description of "F32D1.1"  F32D1.1 encodes an homolog of human SPASTIN (OMIM:604277, mutated in spastic paraplegia), FIDGETIN (OMIM:605295, mutated in fidget mice), and FIDGETIN-LIKE-1, and of Drosophila SPASTIN; recombinant F32D1.1 protein has N-ethylmaleimide-sensitive ATPase activity in vitro, which is strongly dependent on the C368 residue immediately C-terminal to its Walker A motif; F32D1.1 is required for persistence of the germline in RNAi assays.
KOG Annotation  AAA+-type ATPase
What's a KOG?
Evidence for Inhibition 
ePCR Transcript overlap: 6 nt Explain types of evidence for RNAi inhibition
External "F32D1.1" Links  Wormbase NCBI
JA:F32D1.2 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 80 %
Larval  Gro
Adult  Stp
JA:F32D1.2 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_F32D1.2 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of F32D1.2 Browse using GBrowse
Gene Graph
Gene Plot of F32D1.1 Browse using GBrowse
Gene Graph