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RNAi Experiment: JA:F33H1.2 Ace View of JA:F33H1.2
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F33H1.2 (gpd-4)
Description of "F33H1.2"  gpd-4 encodes one of four C. elegans glyceraldehyde-3-phosphate dehydrogenases (GAPDHs); by homology, GPD-4 is predicted to reversibly catalyze the oxidation and phosphorylation of glyceraldehyde-3-phosphate to 1,3-diphosphoglycerate during glycolysis; GPD-4 is required for embryonic and larval development; in C. elegans, GPD-4 and GPD-1 constitute the minor GAPDH isoenzymes and are expressed primarily in embryos, in all cell types.
KOG Annotation  Glyceraldehyde 3-phosphate dehydrogenase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:10171052..10172033)
Transcript overlap: 799 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 756
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.531
Wormbase (BLAST) RNAi primary
External "F33H1.2" Links  Wormbase NCBI
Gene Inhibited  T09F3.3 (gpd-1)
Description of "T09F3.3"  gpd-1 encodes one of four C. elegans glyceraldehyde-3-phosphate dehydrogenases (GAPDHs); by homology, GPD-1 is predicted to reversibly catalyze the oxidation and phosphorylation of glyceraldehyde-3-phosphate to 1,3-diphosphoglycerate during glycolysis; GPD-1 is required for embryogenesis, normal body morphology, and gonad development; in C. elegans, GPD-1 and GPD-4 constitute the minor GAPDH isoenzymes and are expressed primarily in embryos, in all cell types.
KOG Annotation  Glyceraldehyde 3-phosphate dehydrogenase
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 671
Relative score: 0.884 (Best raw score= for Gene )
Specificity index: 0.469
Wormbase (BLAST) RNAi primary
External "T09F3.3" Links  Wormbase NCBI
JA:F33H1.2 Phenotypes Help with Phenotypes
Phenotype  WT
JA:F33H1.2 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_F33H1.2 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of T09F3.3 Browse using GBrowse
Gene Graph
Gene Plot of F33H1.2 Browse using GBrowse
Gene Graph