Link to F39E9.5RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to D1081.1Link to M03D4.5Link to C18C4.4Link to F14H8.3Link to C17H12.7Link to T27C4.5Link to ZK682.1Link to F49F1.13Link to Y113G7A.7Link to R04B5.2Link to C52D10.4Link to F46F5.3geneMap RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to F46F5.14RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to F14H8.3Link to F49F1.13Link to D1081.1Link to M03D4.5Link to C18C4.4Link to C17H12.7Link to T27C4.5Link to F39E9.5Link to Y113G7A.7Link to R04B5.2Link to C52D10.4Link to C28D4.6geneMap Link to F14H8.4RNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to C18C4.4Link to D1081.1Link to F49F1.13Link to F14H8.3Link to R04B5.2Link to T27C4.5Link to Y113G7A.7Link to F46F5.3Link to M03D4.5Link to C17H12.7Link to R04D3.11geneMap Link to R07C12.3RNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to T27C4.2RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to D1081.1Link to F14H8.3Link to C52D10.4Link to F49F1.13Link to R04B5.2Link to C18C4.4Link to Y113G7A.7Link to F46F5.3Link to M03D4.5Link to C17H12.7Link to ZK682.1Link to R04D3.11geneMap RNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: JA:F39E9.5 Ace View of JA:F39E9.5
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F39E9.5
Evidence for Inhibition 
ePCR Status: Unique_ePCR (II:3307613..3309222)
Transcript overlap: 618 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 513
Relative score: 0.544 (Best raw score= for Gene )
Specificity index: 0.059
Wormbase (BLAST) RNAi primary
External "F39E9.5" Links  Wormbase NCBI
Gene Inhibited  C17H12.7
Evidence for Inhibition 
Sliding Window Raw score: 943
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.108
External "C17H12.7" Links  Wormbase NCBI
Gene Inhibited  R04D3.11 (srd-37)
Evidence for Inhibition 
Sliding Window Raw score: 384
Relative score: 0.407 (Best raw score= for Gene )
Specificity index: 0.044
External "R04D3.11" Links  Wormbase NCBI
Gene Inhibited  F46F5.3
Evidence for Inhibition 
Sliding Window Raw score: 113
Relative score: 0.12 (Best raw score= for Gene )
Specificity index: 0.013
External "F46F5.3" Links  Wormbase NCBI
Gene Inhibited  F14H8.3
Evidence for Inhibition 
Sliding Window Raw score: 921
Relative score: 0.977 (Best raw score= for Gene )
Specificity index: 0.105
External "F14H8.3" Links  Wormbase NCBI
Gene Inhibited  C52D10.4
Evidence for Inhibition 
Sliding Window Raw score: 923
Relative score: 0.979 (Best raw score= for Gene )
Specificity index: 0.106
External "C52D10.4" Links  Wormbase NCBI
Gene Inhibited  F49F1.13
Evidence for Inhibition 
Sliding Window Raw score: 416
Relative score: 0.441 (Best raw score= for Gene )
Specificity index: 0.048
External "F49F1.13" Links  Wormbase NCBI
Gene Inhibited  C18C4.4
Evidence for Inhibition 
Sliding Window Raw score: 910
Relative score: 0.965 (Best raw score= for Gene )
Specificity index: 0.104
External "C18C4.4" Links  Wormbase NCBI
Gene Inhibited  C17C3.14
Evidence for Inhibition 
Sliding Window Raw score: 127
Relative score: 0.135 (Best raw score= for Gene )
Specificity index: 0.015
External "C17C3.14" Links  Wormbase NCBI
Gene Inhibited  R04B5.2
Evidence for Inhibition 
Sliding Window Raw score: 837
Relative score: 0.888 (Best raw score= for Gene )
Specificity index: 0.096
External "R04B5.2" Links  Wormbase NCBI
Gene Inhibited  D1081.1
Evidence for Inhibition 
Sliding Window Raw score: 870
Relative score: 0.923 (Best raw score= for Gene )
Specificity index: 0.1
External "D1081.1" Links  Wormbase NCBI
Gene Inhibited  Y113G7A.7
Evidence for Inhibition 
Sliding Window Raw score: 343
Relative score: 0.364 (Best raw score= for Gene )
Specificity index: 0.039
External "Y113G7A.7" Links  Wormbase NCBI
Gene Inhibited  T27C4.5
Evidence for Inhibition 
Sliding Window Raw score: 546
Relative score: 0.579 (Best raw score= for Gene )
Specificity index: 0.063
External "T27C4.5" Links  Wormbase NCBI
Gene Inhibited  R13H7.3
Evidence for Inhibition 
Sliding Window Raw score: 224
Relative score: 0.238 (Best raw score= for Gene )
Specificity index: 0.026
External "R13H7.3" Links  Wormbase NCBI
Gene Inhibited  M03D4.5
Evidence for Inhibition 
Sliding Window Raw score: 495
Relative score: 0.525 (Best raw score= for Gene )
Specificity index: 0.057
External "M03D4.5" Links  Wormbase NCBI
Gene Inhibited  C28D4.6
Evidence for Inhibition 
Sliding Window Raw score: 166
Relative score: 0.176 (Best raw score= for Gene )
Specificity index: 0.019
External "C28D4.6" Links  Wormbase NCBI
JA:F39E9.5 Phenotypes Help with Phenotypes
Phenotype  WT
JA:F39E9.5 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_F39E9.5 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of C17H12.7 Browse using GBrowse
Gene Graph
Gene Plot of R04D3.11 Browse using GBrowse
Gene Graph
Gene Plot of F39E9.5 Browse using GBrowse
Gene Graph
Gene Plot of F46F5.3 Browse using GBrowse
Gene Graph
Gene Plot of C52D10.4 Browse using GBrowse
Gene Graph
Gene Plot of F14H8.3 Browse using GBrowse
Gene Graph
Gene Plot of F49F1.13 Browse using GBrowse
Gene Graph
Gene Plot of C17C3.14 Browse using GBrowse
Gene Graph
Gene Plot of C18C4.4 Browse using GBrowse
Gene Graph
Gene Plot of R04B5.2 Browse using GBrowse
Gene Graph
Gene Plot of D1081.1 Browse using GBrowse
Gene Graph
Gene Plot of Y113G7A.7 Browse using GBrowse
Gene Graph
Gene Plot of T27C4.5 Browse using GBrowse
Gene Graph
Gene Plot of R13H7.3 Browse using GBrowse
Gene Graph
Gene Plot of M03D4.5 Browse using GBrowse
Gene Graph
Gene Plot of C28D4.6 Browse using GBrowse
Gene Graph