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RNAi Experiment: JA:F39H11.1 Ace View of JA:F39H11.1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F39H11.1
KOG Annotation  Uncharacterized conserved protein BCNT
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:8696415..8697554)
Transcript overlap: 714 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 609
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F39H11.1" Links  Wormbase NCBI
Gene Inhibited  F39H11.2 (tlf-1)
Description of "F39H11.2"  The tlf-1 gene encodes a TATA binding protein (TBP)-like factor (TLF-1); TLF-1 is a functional transcriptional factor, and is required in vivo for zygotic embryonic RNA polymerase II transcription.
KOG Annotation  TATA-box binding protein (TBP), component of TFIID and TFIIIB
What's a KOG?
Evidence for Inhibition 
ePCR Transcript overlap: 36 nt Explain types of evidence for RNAi inhibition
External "F39H11.2" Links  Wormbase NCBI
JA:F39H11.1 Phenotypes Help with Phenotypes
Phenotype  WT
JA:F39H11.1 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_F39H11.1 (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of F39H11.1 Browse using GBrowse
Gene Graph
Gene Plot of F39H11.2 Browse using GBrowse
Gene Graph