Link to F39H11.1Link to F39H11.2RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to ZK1236.6RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
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RNAi Experiment: JA:F39H11.2 Ace View of JA:F39H11.2
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F39H11.2 (tlf-1)
Description of "F39H11.2"  The tlf-1 gene encodes a TATA binding protein (TBP)-like factor (TLF-1); TLF-1 is a functional transcriptional factor, and is required in vivo for zygotic embryonic RNA polymerase II transcription.
KOG Annotation  TATA-box binding protein (TBP), component of TFIID and TFIIIB
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:8699868..8700816)
Transcript overlap: 597 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 513
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.84
Wormbase (BLAST) RNAi primary
External "F39H11.2" Links  Wormbase NCBI
Gene Inhibited  ZK1236.6 (pqn-96)
Description of "ZK1236.6"  The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
Evidence for Inhibition 
Sliding Window Raw score: 98
Relative score: 0.191 (Best raw score= for Gene )
Specificity index: 0.16
External "ZK1236.6" Links  Wormbase NCBI
JA:F39H11.2 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 100 % Led (200-500 cells)
Movies/Stacks/Images  /static/images/movie.gif /static/images/movie.gif /static/images/movie.gif /static/images/movie.gif Help
JA:F39H11.2 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_F39H11.2 (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of ZK1236.6 Browse using GBrowse
Gene Graph
Gene Plot of F39H11.2 Browse using GBrowse
Gene Graph