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RNAi Experiment: JA:F39H11.5 Ace View of JA:F39H11.5
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F39H11.5 (pbs-7)
Description of "F39H11.5"  pbs-7 encodes a B-type subunit of the 26S proteasome's 20S protease core particle; by homology, PBS-7 is predicted to function in ATP/ubiquitin-dependent nonlysosomal protein degradation; loss of pbs-7 activity via large-scale RNAi screens indicates that, in C. elegans, PBS-7 is required for normal movement and for embryonic, germline, and larval development.
KOG Annotation  20S proteasome, regulatory subunit beta type PSMB4/PRE4
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:8695313..8696363)
Transcript overlap: 762 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 657
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F39H11.5" Links  Wormbase NCBI
JA:F39H11.5 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 100 %
Adult  Unc
Phenotype  Ocs 1-12 cell arrest
Movies/Stacks/Images  /static/images/movie.gif /static/images/movie.gif Help
JA:F39H11.5 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_F39H11.5 (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of F39H11.5 Browse using GBrowse
Gene Graph