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RNAi Experiment: JA:F46A8.3 Ace View of JA:F46A8.3
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F46A8.3
Description of "F46A8.3"  Associated GO Term : sugar binding
KOG Annotation  Galectin, galactose-binding lectin
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:11242526..11243583)
Transcript overlap: 701 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 659
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.618
Wormbase (BLAST) RNAi primary
External "F46A8.3" Links  Wormbase NCBI
Gene Inhibited  F46A8.8
Description of "F46A8.8"  Associated GO Term : sugar binding
KOG Annotation  Galectin, galactose-binding lectin
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 69
Relative score: 0.105 (Best raw score= for Gene )
Specificity index: 0.065
Wormbase (BLAST) RNAi primary
External "F46A8.8" Links  Wormbase NCBI
Gene Inhibited  F46A8.4
Description of "F46A8.4"  Associated GO Term : sugar binding
KOG Annotation  Galectin, galactose-binding lectin
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 156
Relative score: 0.237 (Best raw score= for Gene )
Specificity index: 0.146
Wormbase (BLAST) RNAi primary
External "F46A8.4" Links  Wormbase NCBI
Gene Inhibited  F49F1.11
Description of "F49F1.11"  Associated GO Term : sugar binding
KOG Annotation  Galectin, galactose-binding lectin
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 182
Relative score: 0.276 (Best raw score= for Gene )
Specificity index: 0.171
Wormbase (BLAST) RNAi secondary
External "F49F1.11" Links  Wormbase NCBI
JA:F46A8.3 Phenotypes Help with Phenotypes
Phenotype  WT
JA:F46A8.3 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_F46A8.3 (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of F46A8.8 Browse using GBrowse
Gene Graph
Gene Plot of F46A8.4 Browse using GBrowse
Gene Graph
Gene Plot of F49F1.11 Browse using GBrowse
Gene Graph
Gene Plot of F46A8.3 Browse using GBrowse
Gene Graph