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RNAi Experiment: JA:F46A9.4 Ace View of JA:F46A9.4
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F46A9.4 (skr-2)
Description of "F46A9.4"  skr-2 encodes a homolog of Skp1 in S. cerevisiae, a core component of the SCF (Skp1p, Cullin, F-box) ubiquitin-ligase complex that facilitates ubiquitin-mediated protein degradation; SKR-2 is required for the restraint of cell proliferation, progression through the pachytene stage of meiosis, and the formation of bivalent chromosomes at diakinesis; SKR-2::GFP is detected exclusively in the intestine.
KOG Annotation  SCF ubiquitin ligase, Skp1 component
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:9469370..9470527)
Transcript overlap: 622 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 496
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F46A9.4" Links  Wormbase NCBI
JA:F46A9.4 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance 90 %
Larval  Gro
Adult  Pvl
Unc
Phenotype  Spn Differentiated, not enclosed
Movies/Stacks/Images  /static/images/movie.gif /static/images/movie.gif /static/images/movie.gif /static/images/movie.gif Help
JA:F46A9.4 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_F46A9.4 (PCR_reagent)
Remark  AB skewed; P1 sometimes fails to rotate
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of F46A9.4 Browse using GBrowse
Gene Graph