RNAi Card Page

RNAi Experiment: JA:F52D2.3

Genes Inhibited

Gene Inhibited

Description of "F52D2.10"

This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.

Evidence for Inhibition

ePCR	Status: Unique_ePCR (X:1954553..1955643) Transcript overlap: 89 nt
Wormbase (BLAST)	RNAi primary

External "F52D2.10" Links

Gene Inhibited

C17H12.7

Evidence for Inhibition

Sliding Window

Raw score: 114
Relative score: 0.463 (Best raw score= for Gene )
Specificity index: 0.067

External "C17H12.7" Links

Gene Inhibited

R04D3.11 (srd-37)

Evidence for Inhibition

Sliding Window

Raw score: 101
Relative score: 0.411 (Best raw score= for Gene )
Specificity index: 0.06

External "R04D3.11" Links

Gene Inhibited

T27C4.5

Evidence for Inhibition

Sliding Window

Raw score: 77
Relative score: 0.313 (Best raw score= for Gene )
Specificity index: 0.045

External "T27C4.5" Links

Gene Inhibited

Y113G7A.7

Evidence for Inhibition

Sliding Window

Raw score: 204
Relative score: 0.829 (Best raw score= for Gene )
Specificity index: 0.12

External "Y113G7A.7" Links

Gene Inhibited

F14H8.3

Evidence for Inhibition

Sliding Window

Raw score: 149
Relative score: 0.606 (Best raw score= for Gene )
Specificity index: 0.088

External "F14H8.3" Links

Gene Inhibited

R13H7.3

Evidence for Inhibition

Sliding Window

Raw score: 82
Relative score: 0.333 (Best raw score= for Gene )
Specificity index: 0.048

External "R13H7.3" Links

Gene Inhibited

C52D10.4

Evidence for Inhibition

Sliding Window

Raw score: 130
Specificity index: 0.077

External "C52D10.4" Links

Gene Inhibited

F49F1.13

Evidence for Inhibition

Sliding Window

Raw score: 130
Specificity index: 0.077

External "F49F1.13" Links

Gene Inhibited

C18C4.4

Evidence for Inhibition

Sliding Window

Raw score: 246
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.145

External "C18C4.4" Links

Gene Inhibited

M03D4.5

Evidence for Inhibition

Sliding Window

Raw score: 98
Relative score: 0.398 (Best raw score= for Gene )
Specificity index: 0.058

External "M03D4.5" Links

Gene Inhibited

R04B5.2

Evidence for Inhibition

Sliding Window

Raw score: 111
Relative score: 0.451 (Best raw score= for Gene )
Specificity index: 0.066

External "R04B5.2" Links

Gene Inhibited

C28D4.6

Evidence for Inhibition

Sliding Window

Raw score: 121
Relative score: 0.492 (Best raw score= for Gene )
Specificity index: 0.071

External "C28D4.6" Links

Gene Inhibited

D1081.1

Evidence for Inhibition

Sliding Window

Raw score: 130
Relative score: 0.528 (Best raw score= for Gene )
Specificity index: 0.077

External "D1081.1" Links

JA:F52D2.3 Phenotypes

Phenotype

JA:F52D2.3 Experiment Details

Ace View

Laboratory

RNAi Reagent & Type

sjj_F52D2.3 (PCR_reagent)

Reference

Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."

Date

2003-1-10

Gene Plot of C17H12.7

Browse using GBrowse

Gene Plot of Y113G7A.7

Browse using GBrowse

Gene Plot of T27C4.5

Browse using GBrowse

Gene Plot of R04D3.11

Browse using GBrowse

Gene Plot of C52D10.4

Browse using GBrowse

Gene Plot of R13H7.3

Browse using GBrowse

Gene Plot of F14H8.3

Browse using GBrowse

Gene Plot of F49F1.13

Browse using GBrowse

Gene Plot of C18C4.4

Browse using GBrowse

Gene Plot of M03D4.5

Browse using GBrowse

Gene Plot of C28D4.6

Browse using GBrowse

Gene Plot of R04B5.2

Browse using GBrowse

Gene Plot of F52D2.10

Browse using GBrowse

Gene Plot of D1081.1

Browse using GBrowse