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RNAi Experiment: JA:F52E4.6 Ace View of JA:F52E4.6
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F52E4.6 (wrt-2)
Description of "F52E4.6"  wrt-2 encodes a (potentially secreted) protein, expressed in seam cells and hypodermal syncytia, with similarity to the carboxy-terminal autoprocessing domain of Drosophila hedgehog; WRT-2 also contains a glutamine/asparagine-rich domain.
KOG Annotation  Sonic hedgehog and related proteins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (X:3092443..3093636)
Transcript overlap: 969 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 864
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F52E4.6" Links  Wormbase NCBI
Gene Inhibited  F52E4.1
Description of "F52E4.1"  F52E4.1 is orthologous to the human gene PROPIONYL-CoA CARBOXYLASE, BETA SUBUNIT (PCCB; OMIM:232050), which when mutated leads to propionicacidemia; F52E4.1 protein is predicted to be mitochondrial.
Evidence for Inhibition 
ePCR Transcript overlap: 6 nt Explain types of evidence for RNAi inhibition
External "F52E4.1" Links  Wormbase NCBI
JA:F52E4.6 Phenotypes Help with Phenotypes
Phenotype  WT
JA:F52E4.6 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_F52E4.6 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of F52E4.1 Browse using GBrowse
Gene Graph
Gene Plot of F52E4.6 Browse using GBrowse
Gene Graph