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RNAi Experiment: JA:F53A2.5 Ace View of JA:F53A2.5
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F53A2.5 (dro-1)
Description of "F53A2.5"  Associated GO Term : DNA binding
KOG Annotation  Class 2 transcription repressor NC2, beta subunit (Dr1)
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:13342066..13343038)
Transcript overlap: 555 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 513
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F53A2.5" Links  Wormbase NCBI
Gene Inhibited  F53A2.4 (nud-1)
Description of "F53A2.4"  nud-1 encodes the C. elegans ortholog of the Aspergillus nidulans nudC, which mediates nuclear migration along Aspergillus hyphae.
KOG Annotation  Nuclear distribution protein NUDC
What's a KOG?
Evidence for Inhibition 
ePCR Transcript overlap: 43 nt Explain types of evidence for RNAi inhibition
External "F53A2.4" Links  Wormbase NCBI
JA:F53A2.5 Phenotypes Help with Phenotypes
Phenotype  WT
JA:F53A2.5 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_F53A2.5 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of F53A2.5 Browse using GBrowse
Gene Graph
Gene Plot of F53A2.4 Browse using GBrowse
Gene Graph