Link to F53G12.9Link to F53G12.8RNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to F53G12.10.2Link to F53G12.10.1Link to F53G12.9Link to F53G12.8RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to Y67D8A.2a.2Link to Y67D8A.2a.1Link to Y67D8A.1.2Link to Y67D8A.1.1RNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: JA:F53G12.8 Ace View of JA:F53G12.8
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F53G12.8
Evidence for Inhibition 
ePCR Status: Best_ePCR (I:113308..114917)
Transcript overlap: 534 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 492
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.591
Wormbase (BLAST) RNAi primary
External "F53G12.8" Links  Wormbase NCBI
Gene Inhibited  F53G12.9
KOG Annotation  Failed axon connections (fax) protein/glutathione S-transferase-like protein
What's a KOG?
Evidence for Inhibition 
ePCR Status: Top50_percentile_ePCR (I:113308..114917)
Transcript overlap: 324 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 261
Relative score: 0.53 (Best raw score= for Gene )
Specificity index: 0.314
Wormbase (BLAST) RNAi primary
External "F53G12.9" Links  Wormbase NCBI
Gene Inhibited  Y67D8A.1
Description of "Y67D8A.1"  Y67D8A.1 is orthologous to the human gene PHOSPHORYLASE KINASE, BETA SUBUNIT (PHKB; OMIM:172490), which when mutated leads to glycogen storage disease.
KOG Annotation  Phosphorylase kinase
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 79
Relative score: 0.161 (Best raw score= for Gene )
Specificity index: 0.095
External "Y67D8A.1" Links  Wormbase NCBI
JA:F53G12.8 Phenotypes Help with Phenotypes
Phenotype  WT
JA:F53G12.8 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_F53G12.8 (PCR_reagent)
Reference  Fraser AG et al. (2000) Nature "Functional genomic analysis of C. elegans chromosome I by systematic RNA ...."
Date  2000-11-16
Gene Plot of Y67D8A.1 Browse using GBrowse
Gene Graph
Gene Plot of F53G12.9 Browse using GBrowse
Gene Graph
Gene Plot of F53G12.8 Browse using GBrowse
Gene Graph