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RNAi Experiment: JA:F54C1.7 Ace View of JA:F54C1.7
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F54C1.7 (pat-10)
Description of "F54C1.7"  pat-10 encodes body wall muscle troponin C, the calcium-binding component of the troponin complex of actin thin filaments; PAT-10 is essential for muscle contraction and thus for completion of embryonic morphogenesis and elongation; by homology, PAT-10 likely functions to regulate body wall muscle contraction in response to changes in intracellular calcium; PAT-10 is expressed in body wall muscle but is also detected in vulval and anal muscles; expression in body wall muscle begins during early embryonic morphogenesis, concurrent with expression of other body wall muscle structural components.
KOG Annotation  Calmodulin and related proteins (EF-Hand superfamily)
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:5019034..5020199)
Transcript overlap: 532 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 427
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F54C1.7" Links  Wormbase NCBI
JA:F54C1.7 Phenotypes Help with Phenotypes
Adult  Ste
JA:F54C1.7 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_F54C1.7 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of F54C1.7 Browse using GBrowse
Gene Graph