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Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: JA:F54D7.1 Ace View of JA:F54D7.1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  C33E10.4
Evidence for Inhibition 
Sliding Window Raw score: 1132
Relative score: 0.972 (Best raw score= for Gene )
Specificity index: 0.216
External "C33E10.4" Links  Wormbase NCBI
Gene Inhibited  Y53C12A.5
Evidence for Inhibition 
Sliding Window Raw score: 585
Relative score: 0.502 (Best raw score= for Gene )
Specificity index: 0.112
External "Y53C12A.5" Links  Wormbase NCBI
Gene Inhibited  T07C12.4
Evidence for Inhibition 
Sliding Window Raw score: 1165
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.222
External "T07C12.4" Links  Wormbase NCBI
Gene Inhibited  B0302.3
Description of "B0302.3"  Associated GO Term : RNA binding
KOG Annotation  Reverse transcriptase
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 602
Relative score: 0.517 (Best raw score= for Gene )
Specificity index: 0.115
External "B0302.3" Links  Wormbase NCBI
Gene Inhibited  F44G3.3
Evidence for Inhibition 
Sliding Window Raw score: 739
Relative score: 0.634 (Best raw score= for Gene )
Specificity index: 0.141
External "F44G3.3" Links  Wormbase NCBI
Gene Inhibited  Y105C5A.7
Evidence for Inhibition 
Sliding Window Raw score: 1014
Relative score: 0.87 (Best raw score= for Gene )
Specificity index: 0.194
External "Y105C5A.7" Links  Wormbase NCBI
JA:F54D7.1 Phenotypes Help with Phenotypes
Phenotype  WT
JA:F54D7.1 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_F54D7.1 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of C33E10.4 Browse using GBrowse
Gene Graph
Gene Plot of Y53C12A.5 Browse using GBrowse
Gene Graph
Gene Plot of T07C12.4 Browse using GBrowse
Gene Graph
Gene Plot of Y105C5A.7 Browse using GBrowse
Gene Graph
Gene Plot of F44G3.3 Browse using GBrowse
Gene Graph
Gene Plot of B0302.3 Browse using GBrowse
Gene Graph