Link to F54D8.2.1Link to F54D8.2.2Link to F54D8.2.3Link to F54D8.4RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to C26E6.11RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to T20B12.1RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to F37D6.1RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
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RNAi Experiment: JA:F54D8.4 Ace View of JA:F54D8.4
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F54D8.4 (cah-1)
Description of "F54D8.4"  cah-1 encodes a member of the carbonic anhydrase family.
KOG Annotation  Carbonic anhydrase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:5083461..5085143)
Transcript overlap: 744 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 618
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.676
Wormbase (BLAST) RNAi primary
External "F54D8.4" Links  Wormbase NCBI
Gene Inhibited  C26E6.11 (tag-339)
Evidence for Inhibition 
Sliding Window Raw score: 142
Relative score: 0.23 (Best raw score= for Gene )
Specificity index: 0.155
Wormbase (BLAST) RNAi primary
External "C26E6.11" Links  Wormbase NCBI
Gene Inhibited  T20B12.1
Description of "T20B12.1"  Associated GO Term : binding
KOG Annotation  Uncharacterized conserved protein, contains TPR repeats
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 77
Specificity index: 0.084
Wormbase (BLAST) RNAi primary
External "T20B12.1" Links  Wormbase NCBI
Gene Inhibited  F37D6.1 (mus-101)
Description of "F37D6.1"  Associated GO Term : intracellular
KOG Annotation  Nucleotide excision repair factor NEF2, RAD4/CUT5 component
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 77
Relative score: 0.125 (Best raw score= for Gene )
Specificity index: 0.084
Wormbase (BLAST) RNAi primary
External "F37D6.1" Links  Wormbase NCBI
JA:F54D8.4 Phenotypes Help with Phenotypes
Phenotype  WT
JA:F54D8.4 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_F54D8.4 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of C26E6.11 Browse using GBrowse
Gene Graph
Gene Plot of F54D8.4 Browse using GBrowse
Gene Graph
Gene Plot of T20B12.1 Browse using GBrowse
Gene Graph
Gene Plot of F37D6.1 Browse using GBrowse
Gene Graph