Link to F54D8.5RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to B0513.8Link to F47D2.2Link to T09F5.7Link to Y45F3A.6Link to F54D8.5Link to Y75B8A.41geneMap Link to B0513.6RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y45F10C.1geneMap Link to T09F5.7RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to B0513.8Link to F47D2.2Link to R13D7.5Link to Y45F3A.6Link to F54D8.5Link to Y75B8A.41geneMap Link to Y75B8A.37RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y45F3A.6geneMap Link to Y45F3A.5RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
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RNAi Experiment: JA:F54D8.5 Ace View of JA:F54D8.5
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F54D8.5
Description of "F54D8.5"  Associated GO Term : RNA binding
KOG Annotation  Reverse transcriptase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:5090564..5091607)
Transcript overlap: 630 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 588
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.235
Wormbase (BLAST) RNAi primary
External "F54D8.5" Links  Wormbase NCBI
Gene Inhibited  R13D7.5
Evidence for Inhibition 
Sliding Window Raw score: 347
Relative score: 0.59 (Best raw score= for Gene )
Specificity index: 0.139
Wormbase (BLAST) RNAi primary
External "R13D7.5" Links  Wormbase NCBI
Gene Inhibited  B0513.8
Evidence for Inhibition 
Sliding Window Raw score: 495
Relative score: 0.842 (Best raw score= for Gene )
Specificity index: 0.198
Wormbase (BLAST) RNAi primary
External "B0513.8" Links  Wormbase NCBI
Gene Inhibited  T09F5.7
Description of "T09F5.7"  Associated GO Term : RNA binding
KOG Annotation  Reverse transcriptase
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 386
Relative score: 0.656 (Best raw score= for Gene )
Specificity index: 0.154
Wormbase (BLAST) RNAi primary
External "T09F5.7" Links  Wormbase NCBI
Gene Inhibited  Y75B8A.41
Evidence for Inhibition 
Sliding Window Raw score: 211
Relative score: 0.359 (Best raw score= for Gene )
Specificity index: 0.084
Wormbase (BLAST) RNAi primary
External "Y75B8A.41" Links  Wormbase NCBI
Gene Inhibited  Y45F3A.6
Evidence for Inhibition 
Sliding Window Raw score: 475
Relative score: 0.808 (Best raw score= for Gene )
Specificity index: 0.19
Wormbase (BLAST) RNAi primary
External "Y45F3A.6" Links  Wormbase NCBI
JA:F54D8.5 Phenotypes Help with Phenotypes
Phenotype  WT
JA:F54D8.5 Experiment Details Ace View
Laboratory  JA
RNAi Reagent & Type  sjj_F54D8.5 (PCR_reagent)
Reference  Kamath RS et al. (2003) Nature "Systemic functional analysis of the Caenorhabditis elegans genome using ...."
Date  2003-1-10
Gene Plot of B0513.8 Browse using GBrowse
Gene Graph
Gene Plot of R13D7.5 Browse using GBrowse
Gene Graph
Gene Plot of T09F5.7 Browse using GBrowse
Gene Graph
Gene Plot of F54D8.5 Browse using GBrowse
Gene Graph
Gene Plot of Y75B8A.41 Browse using GBrowse
Gene Graph
Gene Plot of Y45F3A.6 Browse using GBrowse
Gene Graph